## Error in library(future.apply) :
## there is no package called 'future.apply'
Samples: dcDNA Seq
pychopper: no
mapping version: v6
LoRTIA: yes (stranded only output)
## Bootstrap (r = 0.49)... Done.
## Bootstrap (r = 0.59)... Done.
## Bootstrap (r = 0.7)... Done.
## Bootstrap (r = 0.8)... Done.
## Bootstrap (r = 0.9)... Done.
## Bootstrap (r = 1.0)... Done.
## Bootstrap (r = 1.09)... Done.
## Bootstrap (r = 1.19)... Done.
## Bootstrap (r = 1.29)... Done.
## Bootstrap (r = 1.39)... Done.
The sample 48h_3 stands out!
## Bootstrap (r = 0.5)... Done.
## Bootstrap (r = 0.58)... Done.
## Bootstrap (r = 0.69)... Done.
## Bootstrap (r = 0.77)... Done.
## Bootstrap (r = 0.88)... Done.
## Bootstrap (r = 1.0)... Done.
## Bootstrap (r = 1.08)... Done.
## Bootstrap (r = 1.19)... Done.
## Bootstrap (r = 1.27)... Done.
## Bootstrap (r = 1.38)... Done.
## [1] "ORF74" "ORF41"
## [1] 2
## [1] "ORF63" "ORF74" "CTO" "ORF41"
## [1] 4
## [1] "ORF63" "ORF74"
## [1] 2
## [1] "ORF63" "ORF74"
## [1] 2
## The following genes were removed from their corresponding clusters
## as their silhouette widths were lower than 0.1 and their distance from the group centroid was higher than 0.5:
## ORF63
## ORF74
NA shows the number of genes where the clustering did not yield an unambiguous result.